HPV genotype | Reference sequence ID | Gene | Direction | Sequence 5′-3’ | Primer position | Product size, bp | Annealing Temperature, °C |
---|---|---|---|---|---|---|---|
6 | KU298876.1 | E6, E7 | Forward | AGGGACCGAAAACGGTTCAA | 32 | 1079 | 58 |
Reverse | CTAACATATGGACTACCTAAAT | 1110 | Â | Â | |||
16 | NC_001526 | E6 | Forward | ACCGTTTTGGGTTACACATTTAC | 6996 | 700 | 60 |
Reverse | CTGTCATTTAATTGCTCATAACAGTAGA | 7695 | Â | Â | |||
E7 | Forward | CATTAGAACAGCAATACAACAAACC | 7405 | 579 | 60 | ||
Reverse | TCCACTACAGCCTCTACATAAAACC | 7983 | Â | Â | |||
18 | NC_001526 | E6, E7 | Forward | CATGTCCAACATTCTGTCTACCC | 7751 | 1064 | 58 |
Reverse | TTACAACCCGTGCCCTCC | 957 | Â | Â | |||
31 | J04353.1 | E6, E7 | Forward | AGTAGGGAGTGACCGAAAGTGG | 27 | 959 | 58 |
Reverse | CACTACTGTCTTCATTTTCGTCCTC | 985 | Â | Â | |||
33 | M12732.1 | E6, E7 | Forward | AACTATGCCTTGTAAAAGTGAGTCAC | 7813 | 1116 | 58 |
Reverse | TAAATCCGTGCCACTGTCATC | 1015 | Â | Â | |||
39 | M62849.1 | E6, E7 | Forward | AAGGGAGTAACCGAAAACGG | 34 | 1096 | 58 |
Reverse | CCTGTGCTGTCTCACGCTCT | 1129 | Â | Â | |||
44 | U31788.1 | E6, E7 | Forward | ATCGGTTGACACACACCCTG | 7796 | 1083 | 58 |
Reverse | CATCCGCCTCCTGTCGTTTAACAA | 1045 | Â | Â | |||
51 | KU298901.1 | E6, E7 | Forward | ACTAGGGTGTAACCGAAAAGGG | 17 | 965 | 58 |
Reverse | TCATCCTCATCATCCGAAACAT | 981 | Â | Â | |||
52 | NC_001592.1 | E6 | Forward | ACCGTACCCACAACCACTTTT | 7929 | 738 | 58 |
Reverse | TTGTGGCTTGTTCTGCTTGTC | 706 | Â | Â | |||
E7 | Forward | AACGCCATTATGTCCTGAAGAA | 422 | 554 | 58 | ||
Reverse | CATCCTCGTCCTCTGAAATGTTAT | 975 | Â | Â | |||
53 | GQ472849.1 | E6, E7 | Forward | AGACAGGGAGTAACCGAAATAGG | 24 | 988 | 58 |
Reverse | GCTTTCCTCGTCTGTTTCATCTT | 1011 | Â | Â | |||
58 | D90400 | E6 | Forward | CGTTTTGGGTCACATTGTTCA | 7782 | 702 | 58 |
Reverse | CATAATTGCTCATAGCAGAATAGGTC | 659 | Â | Â | |||
E7 | Forward | TTCGCTATATGGAGACACATTAGAA | 352 | 613 | 58 | ||
Reverse | TTCTTCGTTCTATTACCGCTTCTA | 964 | Â | Â | |||
59 | X77858.1 | E6, E7 | Forward | AAGCAACCGAAAAAGGTCGG | 7805 | 1128 | 58 |
Reverse | TGTGGTATCATCAATAAAATCTACC | 1036 | Â | Â | |||
66 | U31794.1 | E6, E7 | Forward | TTGGGAGTAACCGAAATGGG | 27 | 992 | 58 |
Reverse | CATTCTCCTCCTCGCTTTCAT | 1018 | Â | Â | |||
68 | DQ080079 | E6, E7 | Forward | CCGAAAAAGGTTGGGCACAC | 7682 | 1098 | 58 |
Reverse | TGAACCTGTATCTGTTGCGTT | 958 | Â | Â |